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Package Hierarchies:
org.sbml.jsbml
,
org.sbml.jsbml.ext
,
org.sbml.jsbml.math
,
org.sbml.jsbml.math.compiler
,
org.sbml.jsbml.math.parser
,
org.sbml.jsbml.ontology
,
org.sbml.jsbml.resources
,
org.sbml.jsbml.text.parser
,
org.sbml.jsbml.util
,
org.sbml.jsbml.util.compilers
,
org.sbml.jsbml.util.filters
,
org.sbml.jsbml.validator
,
org.sbml.jsbml.validator.offline
,
org.sbml.jsbml.validator.offline.constraints
,
org.sbml.jsbml.validator.offline.constraints.helper
,
org.sbml.jsbml.validator.offline.factory
,
org.sbml.jsbml.xml
,
org.sbml.jsbml.xml.parsers
,
org.sbml.jsbml.xml.stax
,
org.sbml.jsbml.xml.xstream.converter
Class Hierarchy
java.lang.Object
org.sbml.jsbml.validator.offline.constraints.
AbstractConstraint
<T> (implements org.sbml.jsbml.validator.offline.constraints.
AnyConstraint
<T>)
org.sbml.jsbml.validator.offline.constraints.
ConstraintGroup
<T>
org.sbml.jsbml.validator.offline.constraints.
ValidationConstraint
<T>
org.sbml.jsbml.validator.offline.constraints.
AbstractConstraintDeclaration
(implements org.sbml.jsbml.validator.offline.constraints.
ConstraintDeclaration
, org.sbml.jsbml.validator.offline.factory.
SBMLErrorCodes
)
org.sbml.jsbml.validator.offline.constraints.
AlgebraicRuleConstraints
org.sbml.jsbml.validator.offline.constraints.
AssignmentConstraints
org.sbml.jsbml.validator.offline.constraints.
AssignmentRuleConstraints
org.sbml.jsbml.validator.offline.constraints.
ASTNodeConstraints
org.sbml.jsbml.validator.offline.constraints.
CompartmentConstraints
org.sbml.jsbml.validator.offline.constraints.
CompartmentTypeConstraints
org.sbml.jsbml.validator.offline.constraints.
ConstraintConstraints
org.sbml.jsbml.validator.offline.constraints.
DelayConstraints
org.sbml.jsbml.validator.offline.constraints.
EventAssignmentConstraints
org.sbml.jsbml.validator.offline.constraints.
EventConstraints
org.sbml.jsbml.validator.offline.constraints.
ExplicitRuleConstraints
org.sbml.jsbml.validator.offline.constraints.
FunctionDefinitionConstraints
org.sbml.jsbml.validator.offline.constraints.
InitialAssignmentConstraints
org.sbml.jsbml.validator.offline.constraints.
KineticLawConstraints
org.sbml.jsbml.validator.offline.constraints.
LocalParameterConstraints
org.sbml.jsbml.validator.offline.constraints.
MathContainerConstraints
org.sbml.jsbml.validator.offline.constraints.
ModelConstraints
org.sbml.jsbml.validator.offline.constraints.
ParameterConstraints
org.sbml.jsbml.validator.offline.constraints.
PriorityConstraints
org.sbml.jsbml.validator.offline.constraints.
RateRuleConstraints
org.sbml.jsbml.validator.offline.constraints.
ReactionConstraints
org.sbml.jsbml.validator.offline.constraints.
RuleConstraints
org.sbml.jsbml.validator.offline.constraints.
SBaseConstraints
org.sbml.jsbml.validator.offline.constraints.
SBaseWithDerivedUnitConstraints
org.sbml.jsbml.validator.offline.constraints.
SBaseWithUnitConstraints
org.sbml.jsbml.validator.offline.constraints.
SBMLDocumentConstraints
org.sbml.jsbml.validator.offline.constraints.
SimpleSpeciesReferenceConstraints
org.sbml.jsbml.validator.offline.constraints.
SpeciesConstraints
org.sbml.jsbml.validator.offline.constraints.
SpeciesReferenceConstraints
org.sbml.jsbml.validator.offline.constraints.
SpeciesTypeConstraints
org.sbml.jsbml.validator.offline.constraints.
TreeNodeConstraints
(implements org.sbml.jsbml.validator.offline.constraints.
CoreSpecialErrorCodes
)
org.sbml.jsbml.validator.offline.constraints.
TriggerConstraints
org.sbml.jsbml.validator.offline.constraints.
UnitConstraints
org.sbml.jsbml.validator.offline.constraints.
UnitDefinitionConstraints
org.sbml.jsbml.xml.parsers.
AbstractReaderWriter
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.
AbstractTreeNode
(implements org.sbml.jsbml.util.
TreeNodeWithChangeSupport
)
org.sbml.jsbml.math.
AbstractASTNode
(implements org.sbml.jsbml.math.
ASTNode2
)
org.sbml.jsbml.math.
ASTBoolean
org.sbml.jsbml.math.
ASTFunction
org.sbml.jsbml.math.
ASTArithmeticOperatorNode
org.sbml.jsbml.math.
ASTBinaryFunctionNode
org.sbml.jsbml.math.
ASTCSymbolDelayNode
(implements org.sbml.jsbml.math.
ASTCSymbolNode
)
org.sbml.jsbml.math.
ASTDivideNode
org.sbml.jsbml.math.
ASTLogarithmNode
org.sbml.jsbml.math.
ASTMinusNode
org.sbml.jsbml.math.
ASTPlusNode
org.sbml.jsbml.math.
ASTPowerNode
org.sbml.jsbml.math.
ASTRootNode
org.sbml.jsbml.math.
ASTTimesNode
org.sbml.jsbml.math.
ASTCiFunctionNode
(implements org.sbml.jsbml.math.
ASTCSymbolBaseNode
)
org.sbml.jsbml.math.
ASTLambdaFunctionNode
org.sbml.jsbml.math.
ASTLogicalOperatorNode
org.sbml.jsbml.math.
ASTPiecewiseFunctionNode
org.sbml.jsbml.math.
ASTQualifierNode
org.sbml.jsbml.math.
ASTRelationalOperatorNode
org.sbml.jsbml.math.
ASTUnaryFunctionNode
org.sbml.jsbml.math.
ASTHyperbolicNode
org.sbml.jsbml.math.
ASTTrigonometricNode
org.sbml.jsbml.math.
ASTNumber
org.sbml.jsbml.math.
ASTCiNumberNode
(implements org.sbml.jsbml.math.
ASTCSymbolBaseNode
)
org.sbml.jsbml.math.
ASTCnNumberNode
<T>
org.sbml.jsbml.math.
ASTCnExponentialNode
org.sbml.jsbml.math.
ASTCnIntegerNode
org.sbml.jsbml.math.
ASTCnRationalNode
org.sbml.jsbml.math.
ASTCnRealNode
org.sbml.jsbml.math.
ASTConstantNumber
org.sbml.jsbml.math.
ASTCSymbolAvogadroNode
(implements org.sbml.jsbml.math.
ASTCSymbolNode
)
org.sbml.jsbml.math.
ASTCSymbolTimeNode
(implements org.sbml.jsbml.math.
ASTCSymbolNode
)
org.sbml.jsbml.ext.
AbstractASTNodePlugin
(implements org.sbml.jsbml.ext.
ASTNodePlugin
)
org.sbml.jsbml.
AbstractSBase
(implements org.sbml.jsbml.
SBase
)
org.sbml.jsbml.
AbstractMathContainer
(implements org.sbml.jsbml.
MathContainer
)
org.sbml.jsbml.
Constraint
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Delay
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
EventAssignment
(implements org.sbml.jsbml.
Assignment
)
org.sbml.jsbml.
FunctionDefinition
(implements org.sbml.jsbml.
CallableSBase
, org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
InitialAssignment
(implements org.sbml.jsbml.
Assignment
)
org.sbml.jsbml.
KineticLaw
(implements org.sbml.jsbml.util.
IdManager
, org.sbml.jsbml.
SBaseWithUnit
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Priority
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Rule
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
AlgebraicRule
org.sbml.jsbml.
ExplicitRule
(implements org.sbml.jsbml.
Assignment
, org.sbml.jsbml.
SBaseWithUnit
)
org.sbml.jsbml.
AssignmentRule
org.sbml.jsbml.
RateRule
org.sbml.jsbml.xml.parsers.
SBMLLevel1Rule
org.sbml.jsbml.
StoichiometryMath
org.sbml.jsbml.
Trigger
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
AbstractNamedSBase
(implements org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
AbstractNamedSBaseWithUnit
(implements org.sbml.jsbml.
NamedSBaseWithDerivedUnit
, org.sbml.jsbml.
SBaseWithUnit
)
org.sbml.jsbml.
Event
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
QuantityWithUnit
(implements org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
LocalParameter
org.sbml.jsbml.
Symbol
(implements org.sbml.jsbml.
Variable
)
org.sbml.jsbml.
Compartment
org.sbml.jsbml.
Parameter
org.sbml.jsbml.
Species
(implements org.sbml.jsbml.
CompartmentalizedSBase
)
org.sbml.jsbml.
CompartmentType
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Model
(implements org.sbml.jsbml.util.
IdManager
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Reaction
(implements org.sbml.jsbml.
CallableSBase
, org.sbml.jsbml.
CompartmentalizedSBase
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SimpleSpeciesReference
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
ModifierSpeciesReference
org.sbml.jsbml.
SpeciesReference
(implements org.sbml.jsbml.
Variable
)
org.sbml.jsbml.
SpeciesType
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UnitDefinition
org.sbml.jsbml.
ListOf
<T> (implements java.util.List<E>, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.util.
ListOfWithName
<T>
org.sbml.jsbml.
SBMLDocument
org.sbml.jsbml.
Unit
(implements org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.ext.
AbstractSBasePlugin
(implements org.sbml.jsbml.ext.
SBasePlugin
)
org.sbml.jsbml.
AnnotationElement
org.sbml.jsbml.
Annotation
org.sbml.jsbml.
Creator
org.sbml.jsbml.
CVTerm
org.sbml.jsbml.
History
org.sbml.jsbml.
ASTNode
org.sbml.jsbml.util.
TreeNodeAdapter
org.sbml.jsbml.xml.
XMLToken
org.sbml.jsbml.xml.
XMLNode
org.sbml.jsbml.util.filters.
AndFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
OrFilter
org.sbml.jsbml.validator.offline.constraints.helper.
AssignmentCycleValidation
(implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.util.filters.
AssignmentVariableFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.math.
ASTFactory
org.sbml.jsbml.math.compiler.
ASTNode2Value
<T>
org.sbml.jsbml.util.compilers.
ASTNodeValue
org.sbml.jsbml.math.
ASTUnknown
(implements org.sbml.jsbml.math.
ASTNode2
)
org.sbml.jsbml.util.filters.
BoundaryConditionFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.text.parser.
CobraFormulaParser
(implements org.sbml.jsbml.text.parser.
CobraFormulaParserConstants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
CobraFormulaParser.JJCalls
org.sbml.jsbml.text.parser.
CobraFormulaParserTokenManager
(implements org.sbml.jsbml.text.parser.
CobraFormulaParserConstants
)
org.sbml.jsbml.util.
CobraUtil
org.sbml.jsbml.validator.offline.factory.
ConstraintFactory
org.sbml.jsbml.util.filters.
CVTermFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.validator.offline.constraints.helper.
CycleDetectionTreeNode
org.sbml.jsbml.xml.stax.
DateProcessor
org.sbml.jsbml.util.
Detail
org.sbml.jsbml.validator.offline.constraints.helper.
DuplicatedElementValidationFunction
<T> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.validator.offline.constraints.helper.
DuplicatedMathValidationFunction
<T> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.validator.offline.constraints.helper.
ElementOrderValidationFunction
<T> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
java.util.EventObject (implements java.io.Serializable)
java.beans.PropertyChangeEvent
org.sbml.jsbml.util.
TreeNodeChangeEvent
org.sbml.jsbml.util.
TreeNodeRemovedEvent
org.sbml.jsbml.math.compiler.
FindUnitsCompiler
(implements org.sbml.jsbml.math.compiler.
ASTNode2Compiler
)
org.sbml.jsbml.util.compilers.
FindUnitsCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.math.parser.
FormulaParser
(implements org.sbml.jsbml.math.parser.
FormulaParserConstants
, org.sbml.jsbml.math.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
FormulaParser
(implements org.sbml.jsbml.text.parser.
FormulaParserConstants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.math.parser.
FormulaParser.JJCalls
org.sbml.jsbml.text.parser.
FormulaParser.JJCalls
org.sbml.jsbml.math.parser.
FormulaParserASTNode2
(implements org.sbml.jsbml.math.parser.
FormulaParserASTNode2Constants
, org.sbml.jsbml.math.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
FormulaParserASTNode2
(implements org.sbml.jsbml.text.parser.
FormulaParserASTNode2Constants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.math.parser.
FormulaParserASTNode2.JJCalls
org.sbml.jsbml.text.parser.
FormulaParserASTNode2.JJCalls
org.sbml.jsbml.math.parser.
FormulaParserASTNode2TokenManager
(implements org.sbml.jsbml.math.parser.
FormulaParserASTNode2Constants
)
org.sbml.jsbml.text.parser.
FormulaParserASTNode2TokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserASTNode2Constants
)
org.sbml.jsbml.math.parser.
FormulaParserLL3
(implements org.sbml.jsbml.math.parser.
FormulaParserLL3Constants
, org.sbml.jsbml.math.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
FormulaParserLL3
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.math.parser.
FormulaParserLL3.JJCalls
org.sbml.jsbml.text.parser.
FormulaParserLL3.JJCalls
org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2
(implements org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2Constants
, org.sbml.jsbml.math.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2Constants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2.JJCalls
org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2.JJCalls
org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2TokenManager
(implements org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2Constants
)
org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2TokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2Constants
)
org.sbml.jsbml.math.parser.
FormulaParserLL3TokenManager
(implements org.sbml.jsbml.math.parser.
FormulaParserLL3Constants
)
org.sbml.jsbml.text.parser.
FormulaParserLL3TokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
)
org.sbml.jsbml.math.parser.
FormulaParserTokenManager
(implements org.sbml.jsbml.math.parser.
FormulaParserConstants
)
org.sbml.jsbml.text.parser.
FormulaParserTokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserConstants
)
org.sbml.jsbml.util.filters.
IdenticalUnitDefinitionFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
IdFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.
JAXPFacade
(implements org.sbml.jsbml.util.
DocumentFactory
, org.sbml.jsbml.util.
NodeWriter
, org.sbml.jsbml.util.
SAX2Parser
)
org.sbml.jsbml.
JSBML
org.sbml.jsbml.util.compilers.
MathMLCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.compilers.
HTMLFormula
org.sbml.jsbml.xml.parsers.
MathMLParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.xml.parsers.
MathMLStaxParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
)
org.sbml.jsbml.math.compiler.
MathMLXMLStreamCompiler
org.sbml.jsbml.math.compiler.
HTMLFormula
org.sbml.jsbml.util.compilers.
MathMLXMLStreamCompiler
org.sbml.jsbml.util.
Maths
org.sbml.jsbml.util.
Message
org.sbml.jsbml.xml.xstream.converter.
MessageConverter
org.sbml.jsbml.util.filters.
MetaIdFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.
ModelBuilder
org.sbml.jsbml.validator.
MultipartPost
org.sbml.jsbml.util.filters.
NameFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
SpeciesReferenceFilter
org.sbml.jsbml.util.
Option
org.sbml.jsbml.validator.
OverdeterminationValidator
org.sbml.jsbml.validator.
OverdeterminationValidator.InnerNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.validator.
OverdeterminationValidator.StartNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.validator.
OverdeterminationValidator.TerminalNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.xml.parsers.
PackageInfo
org.sbml.jsbml.xml.parsers.
PackageUtil
org.sbml.jsbml.util.
Pair
<L,V> (implements java.lang.Cloneable, java.util.Map.Entry<K,V>, java.io.Serializable)
org.sbml.jsbml.util.
ValuePair
<L,V> (implements java.lang.Comparable<T>)
org.sbml.jsbml.xml.parsers.
ParserManager
org.sbml.jsbml.resources.
Resource
java.util.ResourceBundle
org.sbml.jsbml.util.
XMLResourceBundleControl.XMLResourceBundle
java.util.ResourceBundle.Control
org.sbml.jsbml.util.
XMLResourceBundleControl
org.sbml.jsbml.util.
ResourceManager
org.sbml.jsbml.xml.parsers.
SBMLCoreParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.xml.xstream.converter.
SBMLErrorConverter
org.sbml.jsbml.validator.offline.factory.
SBMLErrorFactory
org.sbml.jsbml.
SBMLErrorLog
org.sbml.jsbml.xml.stax.
SBMLObjectForXML
org.sbml.jsbml.xml.parsers.
SBMLRDFAnnotationParser
(implements org.sbml.jsbml.xml.parsers.
AnnotationReader
, org.sbml.jsbml.xml.parsers.
AnnotationWriter
)
org.sbml.jsbml.
SBMLReader
(implements java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.xml.stax.
SBMLReader
org.sbml.jsbml.util.
SBMLtools
org.sbml.jsbml.validator.
SBMLValidator
org.sbml.jsbml.
SBMLWriter
(implements java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.xml.stax.
SBMLWriter
org.sbml.jsbml.
SBO
org.sbml.jsbml.util.filters.
SBOFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.validator.offline.constraints.helper.
SBOValidationConstraints
org.sbml.jsbml.util.filters.
SIdFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.math.parser.
SimpleCharStream
org.sbml.jsbml.text.parser.
SimpleCharStream
org.sbml.jsbml.util.
SimpleTreeNodeChangeListener
(implements java.io.Serializable, org.sbml.jsbml.util.
TreeNodeChangeListener
)
org.sbml.jsbml.util.
StringTools
org.sbml.jsbml.math.compiler.
FormulaCompiler
(implements org.sbml.jsbml.math.compiler.
ASTNode2Compiler
)
org.sbml.jsbml.math.compiler.
LibSBMLFormulaCompiler
org.sbml.jsbml.util.compilers.
FormulaCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.compilers.
FormulaCompilerLibSBML
org.sbml.jsbml.util.compilers.
FormulaCompilerNoPiecewise
org.sbml.jsbml.util.compilers.
LibSBMLFormulaCompiler
org.sbml.jsbml.math.compiler.
LaTeXCompiler
(implements org.sbml.jsbml.math.compiler.
ASTNode2Compiler
)
org.sbml.jsbml.util.compilers.
LaTeXCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.
SubModel
org.sbml.jsbml.validator.
SyntaxChecker
org.sbml.jsbml.ontology.
Term
(implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
java.lang.Throwable (implements java.io.Serializable)
java.lang.Error
org.sbml.jsbml.text.parser.
CobraFormulaParser.LookaheadSuccess
org.sbml.jsbml.math.parser.
FormulaParser.LookaheadSuccess
org.sbml.jsbml.text.parser.
FormulaParser.LookaheadSuccess
org.sbml.jsbml.math.parser.
FormulaParserASTNode2.LookaheadSuccess
org.sbml.jsbml.text.parser.
FormulaParserASTNode2.LookaheadSuccess
org.sbml.jsbml.math.parser.
FormulaParserLL3.LookaheadSuccess
org.sbml.jsbml.text.parser.
FormulaParserLL3.LookaheadSuccess
org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2.LookaheadSuccess
org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2.LookaheadSuccess
org.sbml.jsbml.util.
NotImplementedException
org.sbml.jsbml.math.parser.
TokenMgrError
org.sbml.jsbml.text.parser.
TokenMgrError
java.lang.Exception
org.sbml.jsbml.validator.
ModelOverdeterminedException
org.sbml.jsbml.math.parser.
ParseException
org.sbml.jsbml.text.parser.
ParseException
java.lang.RuntimeException
org.sbml.jsbml.xml.
XMLException
org.sbml.jsbml.
SBMLError
org.sbml.jsbml.
LevelVersionError
org.sbml.jsbml.
PropertyException
org.sbml.jsbml.
PropertyNotAvailableException
org.sbml.jsbml.
PropertyUndefinedError
org.sbml.jsbml.
SBMLTypeUndefinedException
org.sbml.jsbml.
SBMLException
org.sbml.jsbml.
IdentifierException
org.sbml.jsbml.math.compiler.
UnitException
org.sbml.jsbml.util.compilers.
UnitException
org.sbml.jsbml.math.parser.
Token
(implements java.io.Serializable)
org.sbml.jsbml.text.parser.
Token
(implements java.io.Serializable)
org.sbml.jsbml.ontology.
Triple
(implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.validator.offline.constraints.helper.
UniqueValidation
<T,U> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.math.compiler.
UnitsCompiler
(implements org.sbml.jsbml.math.compiler.
ASTNode2Compiler
)
org.sbml.jsbml.util.compilers.
UnitsCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.validator.offline.constraints.helper.
UnknownAttributeValidationFunction
<T> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.validator.offline.constraints.helper.
UnknownElementValidationFunction
<T> (implements org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>)
org.sbml.jsbml.validator.offline.
ValidationContext
org.sbml.jsbml.validator.offline.
LoggingValidationContext
(implements org.sbml.jsbml.validator.offline.
ValidationListener
)
org.sbml.jsbml.validator.offline.constraints.helper.
ValidationTools
org.sbml.jsbml.validator.
Validator
org.sbml.jsbml.xml.
XMLAttributes
(implements java.io.Serializable)
org.sbml.jsbml.xml.stax.
XMLLogger
org.sbml.jsbml.xml.
XMLNamespaces
(implements java.io.Serializable)
org.sbml.jsbml.util.filters.
XMLNodeFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.xml.parsers.
XMLNodeReader
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
)
org.sbml.jsbml.xml.parsers.
XMLNodeWriter
org.sbml.jsbml.xml.
XMLTriple
(implements java.io.Serializable)
Interface Hierarchy
org.sbml.jsbml.xml.parsers.
AnnotationReader
org.sbml.jsbml.xml.parsers.
AnnotationWriter
org.sbml.jsbml.validator.offline.constraints.
AnyConstraint
<T>
org.sbml.jsbml.math.compiler.
ASTNode2Compiler
org.sbml.jsbml.util.compilers.
ASTNodeCompiler
java.lang.Cloneable
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.io.Serializable, javax.swing.tree.TreeNode)
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTNode2
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.ext.
ASTNodePlugin
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.text.parser.
CobraFormulaParserConstants
org.sbml.jsbml.validator.offline.constraints.
ConstraintDeclaration
org.sbml.jsbml.validator.offline.constraints.
CoreSpecialErrorCodes
org.sbml.jsbml.util.
DocumentFactory
java.util.EventListener
org.sbml.jsbml.util.
ProgressListener
java.beans.PropertyChangeListener
org.sbml.jsbml.util.
TreeNodeChangeListener
org.sbml.jsbml.util.filters.
Filter
org.sbml.jsbml.math.parser.
FormulaParserASTNode2Constants
org.sbml.jsbml.text.parser.
FormulaParserASTNode2Constants
org.sbml.jsbml.math.parser.
FormulaParserConstants
org.sbml.jsbml.text.parser.
FormulaParserConstants
org.sbml.jsbml.math.parser.
FormulaParserLL3ASTNode2Constants
org.sbml.jsbml.text.parser.
FormulaParserLL3ASTNode2Constants
org.sbml.jsbml.math.parser.
FormulaParserLL3Constants
org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
org.sbml.jsbml.util.
IdManager
org.sbml.jsbml.math.parser.
IFormulaParser
org.sbml.jsbml.text.parser.
IFormulaParser
org.sbml.jsbml.util.
NodeWriter
org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>
org.sbml.jsbml.xml.parsers.
PackageParser
org.sbml.jsbml.xml.parsers.
ReadingParser
org.sbml.jsbml.util.
SAX2Parser
org.sbml.jsbml.validator.offline.factory.
SBMLErrorCodes
org.sbml.jsbml.
SBMLInputConverter
<T>
org.sbml.jsbml.
SBMLOutputConverter
<T>
java.io.Serializable
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.lang.Cloneable, javax.swing.tree.TreeNode)
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTNode2
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.ext.
ASTNodePlugin
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
javax.swing.tree.TreeNode
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTNode2
org.sbml.jsbml.math.
ASTCSymbolBaseNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.math.
ASTCSymbolNode
org.sbml.jsbml.ext.
ASTNodePlugin
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
CompartmentalizedSBase
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
UniqueSId
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueSId
org.sbml.jsbml.
Assignment
(also extends org.sbml.jsbml.
MathContainer
)
org.sbml.jsbml.
UniqueNamedSBase
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.validator.offline.constraints.
ValidationFunction
<T>
org.sbml.jsbml.validator.offline.
ValidationListener
org.sbml.jsbml.xml.parsers.
WritingParser
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.
AbstractSBase.NOTES_TYPE
org.sbml.jsbml.
ASTNode.Type
org.sbml.jsbml.
SBMLException.Category
org.sbml.jsbml.
SBMLException.Code
org.sbml.jsbml.
SBMLException.Type
org.sbml.jsbml.
CVTerm.Qualifier
org.sbml.jsbml.
CVTerm.Type
org.sbml.jsbml.
ListOf.Type
org.sbml.jsbml.
SBMLError.SEVERITY
org.sbml.jsbml.
Unit.Kind
org.sbml.jsbml.validator.
SBMLValidator.CHECK_CATEGORY
org.sbml.jsbml.xml.parsers.
SBMLRDFAnnotationParser.NODE_COLOR
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